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1

Molecular characterization of Neisseria gonorrhoeae identifies transmission and resistance of one ciprofloxacin-resistant strain

MAGNUS UNEMO, ANNELI SJÖSTRAND, MICHAEL AKHRAS, BABACK GHARIZADEH, EMMA LINDBÄCK, NADER POURMAND, BENGT WRETLIND, HANS FREDLUND

Journal:

Year:

2007

Language:

english

File:

PDF, 185 KB

english, 2007

2

Pyrosequencing of the DNA gyrase gene in Neisseria species: effective indicator of ciprofloxacin resistance in Neisseria gonorrhoeae

EMMA LINDBÄCK, MAGNUS UNEMO, MICHAEL AKHRAS, BABACK GHARIZADEH, HANS FREDLUND, NADER POURMAND, BENGT WRETLIND

Journal:

Year:

2006

Language:

english

File:

PDF, 56 KB

english, 2006

3

Methodological improvements of pyrosequencing technology

Baback Gharizadeh, Michael Akhras, Nader Nourizad, Mehran Ghaderi, Kenji Yasuda, Pål Nyrén, Nader Pourmand

Journal:

Journal of Biotechnology

Year:

2006

Language:

english

File:

PDF, 269 KB

english, 2006

4

Multiple group-specific sequencing primers for reliable and rapid DNA sequencing

Baback Gharizadeh, Andreas Ohlin, Paula Mölling, Anders Bäckman, Bahram Amini, Per Olcén, Pål Nyrén

Journal:

Molecular and Cellular Probes

Year:

2003

Language:

english

File:

PDF, 579 KB

english, 2003

5

Does HPV-status 6–12 months after treatment of high grade dysplasia in the uterine cervix predict long term recurrence?

Björn Strander, Walter Ryd, Keng-Ling Wallin, Bengt Wärleby, Biying Zheng, Ian Milsom, Baback Gharizadeh, Nader Pourmand, Agneta Andersson-Ellström

Journal:

European Journal of Cancer

Year:

2007

Language:

english

File:

PDF, 169 KB

english, 2007

6

Minority Variants Associated with Transmitted and Acquired HIV-1 Nonnucleoside Reverse Transcriptase Inhibitor Resistance: Implications for the Use of Second-Generation Nonnucleoside Reverse Transcriptase Inhibitors

Varghese, Vici, Shahriar, Rajin, Rhee, Soo-Yon, Liu, Tommy, Simen, Birgitte B, Egholm, Michael, Hanczaruk, Bozena, Blake, Lisbeth A, Gharizadeh, Baback, Babrzadeh, Farbod, Bachmann, Michael H, Fessel,

Journal:

JAIDS Journal of Acquired Immune Deficiency Syndromes

Year:

2009

Language:

english

File:

PDF, 111 KB

english, 2009

7

Pyrosequencing Technology for Short DNA Sequencing and Whole Genome Sequencing

GHARIZADEH, Baback, GHADERI, Mehran, NYRÉN, Pål

Journal:

Seibutsu Butsuri

Year:

2007

Language:

english

File:

PDF, 284 KB

english, 2007

8

Influence of eotaxin 67G>A polymorphism on plasma eotaxin concentrations in myocardial infarction survivors and healthy controls

Yuri Sheikine, Birgitta Olsen, Baback Gharizadeh, Ken Jatta, Per Tornvall, Mehran Ghaderi

Journal:

Atherosclerosis

Year:

2006

Language:

english

File:

PDF, 197 KB

english, 2006

9

Making Sense of Intratumor Genetic Heterogeneity: Altered Frequency of Androgen Receptor CAG Repeat Length Variants in Breast Cancer Tissues

Gottlieb, Bruce, Alvarado, Carlos, Wang, Chunlin, Gharizadeh, Baback, Babrzadeh, Farbod, Richards, Brent, Batist, Gerald, Basik, Mark, Beitel, Lenore K., Trifiro, Mark

Journal:

Year:

2013

Language:

english

File:

PDF, 495 KB

english, 2013

10

7‐Deaza‐2′‐Deoxyadenosine‐5′‐Triphosphate as an Alternative Nucleotide for the Pyrosequencing Technology

Eriksson †, Jonas, Gharizadeh †, Baback, Nourizad, Nader, Nyrén, Pål

Journal:

Nucleosides Nucleotides & Nucleic Acids

Year:

2004

Language:

english

File:

PDF, 351 KB

english, 2004

11

Pyrosequencing™ technology at elevated temperature

Jonas Eriksson, Baback Gharizadeh, Tommy Nordström, Pål Nyrén

Journal:

ELECTROPHORESIS

Year:

2004

Language:

english

File:

PDF, 181 KB

english, 2004

12

Single-nucleotide polymorphisms in theB7H3gene are not associated with human autoimmune myasthenia gravis

Priya Sakthivel,Xiongbiao Wang,Baback Gharizadeh,Ricardo Giscombe…

Journal:

Journal of Genetics

Year:

2006

Language:

english

File:

PDF, 40 KB

english, 2006

13

Type-Specific Multiple Sequencing Primers

Gharizadeh, Baback, Oggionni, Maria, Zheng, Biying, Akom, Edit, Pourmand, Nader, Ahmadian, Afshin, Wallin, Keng-Ling, Nyrén, Pål

Journal:

The Journal of Molecular Diagnostics

Year:

2005

Language:

english

File:

PDF, 737 KB

english, 2005

14

Genotypes of CCR2 and CCR5 chemokine receptors in human myasthenia gravis

Zhao, Xiaoyan, Gharizadeh, Baback, Hjelmström, Peter, Pirskanen, Ritva, Nyrén, Pål, Lefvert, Ann-Kari, Ghaderi, Mehran

Journal:

International Journal of Molecular Medicine

Year:

2003

Language:

english

File:

PDF, 1.20 MB

english, 2003

15

Differential expression of viral agents in lymphoma tissues of patients with ABC diffuse large B‑cell lymphoma from high and low endemic infectious disease regions

Hï¿½gfeldt, Therese, Jaing, Crystal, Mc Loughlin, Kevin, Thissen, James, Gardner, Shea, Bahnassy, Abeer, Gharizadeh, Baback, Lundahl, Joachim, ï¿½sterborg, Anders, Porwit, Anna, Zekri, Abdel‑Rahman, K

Journal:

Oncology Letters

Year:

2016

Language:

english

File:

PDF, 610 KB

english, 2016

16

Detection of gyrA mutations associated with ciprofloxacin resistance in Neisseria gonorrhoeae by rapid and reliable pre-programmed short DNA sequencing

Baback Gharizadeh, Michael Akhras, Magnus Unemo, Bengt Wretlind, Pål Nyrén, Nader Pourmand

Journal:

International Journal of Antimicrobial Agents

Year:

2005

Language:

english

File:

PDF, 200 KB

english, 2005

17

Ultra‐Deep Pyrosequencing of Hepatitis B Virus Quasispecies from Nucleoside and Nucleotide Reverse‐Transcriptase Inhibitor (NRTI)–Treated Patients and NRTI‐Naive Patients

Margeridon‐Thermet, Severine, Shulman, Nancy S., Ahmed, Aijaz, Shahriar, Rajin, Liu, Tommy, Wang, Chunlin, Holmes, Susan P., Babrzadeh, Farbod, Gharizadeh, Baback, Hanczaruk, Bozena, Simen, Birgitte B

Journal:

The Journal of Infectious Diseases

Year:

2009

Language:

english

File:

PDF, 114 KB

english, 2009

18

Multiple-primer DNA sequencing method

Baback Gharizadeh, Mehran Ghaderi, Declan Donnelly, Bahram Amini, Keng-Ling Wallin, Pål Nyrén

Journal:

ELECTROPHORESIS

Year:

2003

Language:

english

File:

PDF, 279 KB

english, 2003

19

Long-Read Pyrosequencing Using Pure 2′-Deoxyadenosine-5′-O′-(1-thiotriphosphate) Sp-Isomer

Baback Gharizadeh, Tommy Nordström, Afshin Ahmadian, Mostafa Ronaghi, Pål Nyrén

Journal:

Analytical Biochemistry

Year:

2002

Language:

english

File:

PDF, 164 KB

english, 2002

20

A mathematical model of the Pyrosequencing reaction system

Anna Svantesson, Pål O. Westermark, Jeanette Hellgren Kotaleski, Baback Gharizadeh, Anders Lansner, Pål Nyrén

Journal:

Biophysical Chemistry

Year:

2004

Language:

english

File:

PDF, 353 KB

english, 2004

21

Viral Population Estimation Using Pyrosequencing

Eriksson, Nicholas, Pachter, Lior, Mitsuya, Yumi, Rhee, Soo-Yon, Wang, Chunlin, Gharizadeh, Baback, Ronaghi, Mostafa, Shafer, Robert W., Beerenwinkel, Niko, Tesler, Glenn

Journal:

PLoS Computational Biology

Year:

2008

Language:

english

File:

PDF, 436 KB

english, 2008

22

Improvements in Pyrosequencing technology by employing Sequenase polymerase

Baback Gharizadeh, Jonas Eriksson, Nader Nourizad, Tommy Nordström, Pål Nyrén

Journal:

Analytical Biochemistry

Year:

2004

Language:

english

File:

PDF, 983 KB

english, 2004

23

Method for clone checking

Nader Nourizad, Baback Gharizadeh, Pål Nyrén

Journal:

ELECTROPHORESIS

Year:

2003

Language:

english

File:

PDF, 90 KB

english, 2003

24

MHC2TA Single Nucleotide Polymorphism and Genetic Risk for Autoimmune Adrenal Insufficiency

Ghaderi, Mehran, Gambelunghe, Giovanni, Tortoioli, Cristina, Brozzetti, Annalisa, Jatta, Ken, Gharizadeh, Baback, De Bellis, Annamaria, Pecori Giraldi, Francesca, Terzolo, Massimo, Betterle, Corrado,

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2006

Language:

english

File:

PDF, 75 KB

english, 2006

25

Navigating the Pandemic Response Life Cycle: Molecular Diagnostics and Immunoassays in the Context of COVID-19 Management

Zhang, Jingwei, Gharizadeh, Baback, Lu, Daru, Yue, Junqiu, Yu, Mingxia, Liu, Yue, Zhou, Meiying

Journal:

IEEE Reviews in Biomedical Engineering

Year:

2020

File:

PDF, 1.56 MB

2020

26

Sa.65. Influence of Eotaxin 67g>a Polymorphism on Plasma Eotaxin Concentrations in Myocardial Infarction Survivors and Healthy Controls

Yuri Sheikine, Birgitta Olsen, Baback Gharizadeh, Ken Jatta, Per Tornvall, Mehran Ghaderi

Journal:

Clinical Immunology

Year:

2006

Language:

english

File:

PDF, 52 KB

english, 2006

27

Method Enabling Fast Partial Sequencing of cDNA Clones

Tommy Nordström, Baback Gharizadeh, Nader Pourmand, Pål Nyren, Mostafa Ronaghi

Journal:

Analytical Biochemistry

Year:

2001

Language:

english

File:

PDF, 92 KB

english, 2001

28

Sentinel-base DNA genotyping using multiple sequencing primers for high-risk human papillomaviruses

Baback Gharizadeh, Biying Zheng, Michael Akhras, Mehran Ghaderi, Olufisayo Jejelowo, Björn Strander, Pål Nyrén, Keng-Ling Wallin, Nader Pourmand

Journal:

Molecular and Cellular Probes

Year:

2006

Language:

english

File:

PDF, 311 KB

english, 2006

29

Mutation detection by pyrosequencing: sequencing of exons 5–8 of the p53 tumor suppressor gene

Carlos A Garcia, Afshin Ahmadian, Baback Gharizadeh, Joakim Lundeberg, Mostafa Ronaghi, Pål Nyrén

Journal:

Year:

2000

Language:

english

File:

PDF, 386 KB

english, 2000

30

Methylotrophic yeast Pichia pastoris as a host for production of ATP-diphosphohydrolase (apyrase) from potato tubers (Solanum tuberosum)

Nader Nourizad, Maria Ehn, Baback Gharizadeh, Sophia Hober, Pål Nyrén

Journal:

Protein Expression and Purification

Year:

2003

Language:

english

File:

PDF, 171 KB

english, 2003

31

Pyrosequencing for discovery and analysis of DNA sequence variations

Ronaghi, Mostafa, Shokralla, Shadi, Gharizadeh, Baback

Journal:

Pharmacogenomics

Year:

2007

Language:

english

File:

PDF, 147 KB

english, 2007

32

Single-Nucleotide Polymorphism Analysis by Pyrosequencing

Afshin Ahmadian, Baback Gharizadeh, Anna C. Gustafsson, Fredrik Sterky, Pål Nyrén, Mathias Uhlén, Joakim Lundeberg

Journal:

Analytical Biochemistry

Year:

2000

Language:

english

File:

PDF, 129 KB

english, 2000

33

Tag-array based HPV genotyping by competitive hybridization and extension

Max Käller, Emilie Hultin, Biying Zheng, Baback Gharizadeh, Keng-Ling Wallin, Joakim Lundeberg, Afshin Ahmadian

Journal:

Journal of Virological Methods

Year:

2005

Language:

english

File:

PDF, 276 KB

english, 2005

34

Large-scale Pyrosequencing of synthetic DNA: A comparison with results from Sanger dideoxy sequencing

Baback Gharizadeh, Zelek S. Herman, Robert G. Eason, Olufisayo Jejelowo, Nader Pourmand

Journal:

ELECTROPHORESIS

Year:

2006

Language:

english

File:

PDF, 299 KB

english, 2006

35

High-fidelity gene synthesis by retrieval of sequence-verified DNA identified using high-throughput pyrosequencing

Matzas, Mark, Stähler, Peer F, Kefer, Nathalie, Siebelt, Nicole, Boisguérin, Valesca, Leonard, Jack T, Keller, Andreas, Stähler, Cord F, Häberle, Pamela, Gharizadeh, Baback

Journal:

Nature Biotechnology

Year:

2010

Language:

english

File:

PDF, 502 KB

english, 2010

36

Typing of Human Papillomavirus by Pyrosequencing

Gharizadeh, Baback, Kalantari, Mina, Garcia, Carlos A, Johansson, Bo, Nyrén, Pål

Journal:

Laboratory Investigation

Year:

2001

Language:

english

File:

PDF, 2.08 MB

english, 2001

37

Pyrosequencing enhancement for better detection limit and sequencing homopolymers

Min Gong, Shi-Hui Foo, Lifang Lin, Edison T. Liu, Baback Gharizadeh, Sanket Goel

Journal:

Biochemical and Biophysical Research Communications

Year:

2010

Language:

english

File:

PDF, 355 KB

english, 2010

38

Prevalence and genotype distribution of cervical human papillomavirus (HPV) among women in urban Tianjin, China

Chen, Xiujie, Wallin, Keng-Ling, Duan, Meng, Gharizadeh, Baback, Zheng, Biying, Qu, Pengpeng

Journal:

Journal of Medical Virology

Year:

2015

Language:

english

File:

PDF, 560 KB

english, 2015

39

High Throughput Sequencing Reveals a Complex Pattern of Dynamic Interrelationships among Human T Cell Subsets

Chunlin Wang, Catherine M. Sanders, Qunying Yang, Harry W. Schroeder, Jr., Elijah Wang, Farbod Babrzadeh, Baback Gharizadeh, Richard M. Myers, James R. Hudson, Jr., Ronald W. Davis and Jian Han

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.40 MB

english, 2010

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